torch_staintools package

Subpackages

• torch_staintools.augmentor package
  • Submodules
  • torch_staintools.augmentor.base module
    • Augmentor
      • Augmentor.augment()
      • Augmentor.build()
      • Augmentor.channel_rand()
      • Augmentor.concentration_solver
      • Augmentor.device
      • Augmentor.forward()
      • Augmentor.get_stain_matrix
      • Augmentor.luminosity_threshold
      • Augmentor.num_stains
      • Augmentor.randn_range()
      • Augmentor.regularizer
      • Augmentor.sigma_alpha
      • Augmentor.sigma_beta
      • Augmentor.target_concentrations
      • Augmentor.target_stain_idx
  • torch_staintools.augmentor.factory module
    • AugmentorBuilder
      • AugmentorBuilder.build()
  • Module contents
• torch_staintools.base_module package
  • Submodules
  • torch_staintools.base_module.base module
    • CachedRNGModule
      • CachedRNGModule.CACHE_FIELD
      • CachedRNGModule.build()
      • CachedRNGModule.cache_initialized()
      • CachedRNGModule.cache_size_limit
      • CachedRNGModule.device
      • CachedRNGModule.dump_cache()
      • CachedRNGModule.rng
      • CachedRNGModule.tensor_cache
      • CachedRNGModule.tensor_from_cache()
      • CachedRNGModule.tensor_from_cache_helper()
      • CachedRNGModule.to()
  • Module contents
• torch_staintools.cache package
  • Submodules
  • torch_staintools.cache.base module
    • Cache
      • Cache.build()
      • Cache.data_cache
      • Cache.dump()
      • Cache.get()
      • Cache.get_batch()
      • Cache.is_cached()
      • Cache.load()
      • Cache.query()
      • Cache.size_in_bound()
      • Cache.size_limit
      • Cache.write_batch()
      • Cache.write_to_cache()
  • torch_staintools.cache.tensor_cache module
    • TensorCache
      • TensorCache.build()
      • TensorCache.data_cache
      • TensorCache.device
      • TensorCache.is_cached()
      • TensorCache.load()
      • TensorCache.query()
      • TensorCache.to()
      • TensorCache.validate_value_type()
  • Module contents
• torch_staintools.constants package
  • Submodules
  • torch_staintools.constants.config module
  • torch_staintools.constants.param module
  • Module contents
• torch_staintools.functional package
  • Subpackages
    • torch_staintools.functional.compile package
      • Module contents
    • torch_staintools.functional.concentration package
      • Submodules
      • torch_staintools.functional.concentration.implementation module
      • Module contents
    • torch_staintools.functional.conversion package
      • Submodules
      • torch_staintools.functional.conversion.lab module
      • torch_staintools.functional.conversion.od module
      • Module contents
    • torch_staintools.functional.optimization package
      • Submodules
      • torch_staintools.functional.optimization.dict_learning module
      • torch_staintools.functional.optimization.solver module
      • torch_staintools.functional.optimization.sparse_util module
      • Module contents
    • torch_staintools.functional.stain_extraction package
      • Submodules
      • torch_staintools.functional.stain_extraction.extractor module
      • torch_staintools.functional.stain_extraction.utils module
      • Module contents
    • torch_staintools.functional.tissue_mask package
      • Module contents
    • torch_staintools.functional.utility package
      • Submodules
      • torch_staintools.functional.utility.implementation module
      • Module contents
  • Submodules
  • torch_staintools.functional.eps module
    • get_eps()
  • Module contents
• torch_staintools.normalizer package
  • Submodules
  • torch_staintools.normalizer.base module
    • DataInput
      • DataInput.img
      • DataInput.uri
    • Normalizer
      • Normalizer.build()
      • Normalizer.fit()
      • Normalizer.forward()
      • Normalizer.transform()
  • torch_staintools.normalizer.factory module
    • NormalizerBuilder
      • NormalizerBuilder.build()
  • torch_staintools.normalizer.reinhard module
    • ReinhardNormalizer
      • ReinhardNormalizer.build()
      • ReinhardNormalizer.fit()
      • ReinhardNormalizer.forward()
      • ReinhardNormalizer.luminosity_threshold
      • ReinhardNormalizer.normalize_helper()
      • ReinhardNormalizer.target_means
      • ReinhardNormalizer.target_stds
      • ReinhardNormalizer.transform()
  • torch_staintools.normalizer.separation module
    • StainSeparation
      • StainSeparation.build()
      • StainSeparation.concentration_solver
      • StainSeparation.fit()
      • StainSeparation.forward()
      • StainSeparation.get_stain_matrix
      • StainSeparation.num_stains
      • StainSeparation.repeat_stain_mat()
      • StainSeparation.stain_matrix_target
      • StainSeparation.target_concentrations
      • StainSeparation.transform()
  • Module contents

Submodules

torch_staintools.version module

Module contents